STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_1286KEGG: dth:DICTH_0238 lipoprotein, putative. (400 aa)    
Predicted Functional Partners:
Dtur_1151
PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: dth:DICTH_1023 DNA translocase FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.590
Dtur_0603
TIGRFAM: M6 family metalloprotease domain protein; PFAM: peptidase M6 immune inhibitor A; KEGG: dth:DICTH_0455 putative protease.
 
 0.577
Dtur_1449
KEGG: dth:DICTH_1344 glycosyl transferase.
    
 
 0.543
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.506
Dtur_1102
KEGG: dth:DICTH_0974 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41.
  
   0.461
Dtur_1284
PFAM: integrase domain protein SAM domain protein; KEGG: ctc:CTC01567 DNA integration/recombination protein; Belongs to the 'phage' integrase family.
      
 0.417
Dtur_1282
PFAM: protein of unknown function DUF362; KEGG: dth:DICTH_1179 hypothetical protein.
      
 0.410
Dtur_1294
PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cpo:COPRO5265_0611 modification methylase, type III R/M system.
      
 0.410
Dtur_1297
PFAM: type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: cpo:COPRO5265_0612 hypothetical protein.
      
 0.410
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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