STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_1773PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dth:DICTH_1663 putative C4-dicarboxylate transporter, small permease protein. (159 aa)    
Predicted Functional Partners:
Dtur_1772
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dth:DICTH_1662 C4-dicarboxylate transporter large subunit.
 
 
 0.991
Dtur_1774
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dth:DICTH_1664 putative C4-dicarboxylate transporter, periplasmic C4-dicarboxylate-binding protein.
 
  
 0.945
Dtur_0303
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dth:DICTH_0032 trap dicarboxylate transporter, dCTP subunit, putative.
 
  
 0.878
Dtur_1771
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dth:DICTH_1661 versicolorin reductase.
  
    0.764
Dtur_1770
PFAM: beta-lactamase domain protein; KEGG: dth:DICTH_1660 nitric oxide reductase.
       0.468
Dtur_0299
KEGG: dth:DICTH_0028 hypothetical protein.
  
     0.463
Dtur_0298
PFAM: conserved hypothetical protein; KEGG: dth:DICTH_0027 tricarboxylate-binding protein.
  
     0.423
Dtur_1776
Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: dth:DICTH_1666 transcriptional regulator.
       0.416
Dtur_1775
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: dth:DICTH_1665 D-3-phosphoglycerate dehydrogenase.
       0.415
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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