STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_1789PFAM: protein of unknown function RIO1; tyrosine protein kinase; CHASE2 domain protein; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: dth:DICTH_1679 putative protein kinase. (666 aa)    
Predicted Functional Partners:
Dtur_1788
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: dth:DICTH_1678 forkhead-associated protein.
 
 
 
 0.901
Dtur_1790
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
     
 0.683
Dtur_0284
KEGG: npu:Npun_R2901 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
  
 0.669
Dtur_0309
KEGG: dth:DICTH_1557 hypothetical protein.
   
 
 0.653
Dtur_1218
Adenylate/guanylate cyclase with Chase sensor; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: dth:DICTH_1093 adenylate cyclase.
 
   
0.525
Dtur_1759
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dth:DICTH_1650 GGDEF domain protein.
 
  
 0.508
Dtur_0911
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: CBS domain containing protein; ATP-binding region ATPase domain protein; KEGG: dth:DICTH_0761 anti-sigma regulatory factor.
   
 
 0.498
Dtur_1792
PFAM: Auxin Efflux Carrier; KEGG: dth:DICTH_1682 transporter, auxin efflux carrier (AEC) family.
  
    0.497
Dtur_1791
PFAM: major facilitator superfamily MFS_1; KEGG: dth:DICTH_1681 transporter, major facilitator family.
       0.488
Dtur_1793
PFAM: Citrate transporter; protein of unknown function DUF401; KEGG: dth:DICTH_1683 hypothetical protein.
       0.488
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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