STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090CFX0RNase III domain-containing protein. (335 aa)    
Predicted Functional Partners:
PODANS_5_8910
Podospora anserina S mat+ genomic DNA chromosome 5, supercontig 9.
    
 0.805
PODANS_4_8620
Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 4.
    
 0.805
PODANS_2_12210
Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.792
PODANS_7_390
Podospora anserina S mat+ genomic DNA chromosome 7, supercontig 3.
   
 
 0.758
A0A090CHP0
Putative mitochondrial LSU ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.752
A0A090CX33
Uncharacterized protein.
  
 
 0.750
PODANS_7_7210
Podospora anserina S mat+ genomic DNA chromosome 7, supercontig 1.
   
 
 0.750
A0A090CGN1
Putative mitochondrial SSU ribosomal protein L32.
  
   0.734
PODANS_6_10720
Podospora anserina S mat+ genomic DNA chromosome 6, supercontig 4.
  
 
 0.726
PODANS_4_6710
Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 4.
   
 
 0.726
Your Current Organism:
Podospora anserina
NCBI taxonomy Id: 515849
Other names: P. anserina S mat+, Podospora anserina FGSC #10383, Podospora anserina S mat+
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