STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090CJ00Putative catabolic L-serine/threonine dehydratase. (394 aa)    
Predicted Functional Partners:
PODANS_3_6450
Podospora anserina S mat+ genomic DNA chromosome 3, supercontig 2.
  
 
 0.978
PODANS_6_3950
Podospora anserina S mat+ genomic DNA chromosome 6, supercontig 2.
  
 
 0.976
PODANS_3_11330
Tryptophan synthase.
  
 0.975
PODANS_3_3200
Acetolactate synthase.
  
 0.974
PODANS_1_2060
Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1.
  
 
 0.947
A0A090CUG5
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
     
 0.945
PODANS_4_660
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
     
 0.945
PODANS_3_8220
Podospora anserina S mat+ genomic DNA chromosome 3, supercontig 2.
  
 0.938
PODANS_7_3260
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
0.937
PODANS_1_19710
Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 4.
    
 0.920
Your Current Organism:
Podospora anserina
NCBI taxonomy Id: 515849
Other names: P. anserina S mat+, Podospora anserina FGSC #10383, Podospora anserina S mat+
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.