STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090CKF4Putative negative transcriptional regulator. (316 aa)    
Predicted Functional Partners:
PODANS_1_6990
Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1.
    
 0.572
PODANS_4_7790
Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 4.
    
 0.572
PODANS_1_8600
Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1.
   
 0.515
A0A090D714
BZIP domain-containing protein.
    
 0.512
PODANS_5_3280
Putative fusion protein: ubiquitin-cytosolic 40S ribosomal protein Rps27a.
    
 0.512
PODANS_1_6170
Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 1.
    
 0.469
A0A090CFT3
Uncharacterized protein.
    
  0.467
A0A090CGD4
Putative fusion protein: ubiquitin-cytosolic 60S ribosomal protein Rpl40.
    
  0.467
PODANS_2_2180
Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2.
    
  0.467
Your Current Organism:
Podospora anserina
NCBI taxonomy Id: 515849
Other names: P. anserina S mat+, Podospora anserina FGSC #10383, Podospora anserina S mat+
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