STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090CTU7Putative nucleoporin. (1848 aa)    
Predicted Functional Partners:
A0A090CMD9
Putative nuceloporin.
   
 0.999
A0A090CT17
Uncharacterized protein.
  
 0.977
PODANS_4_9030
Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 4.
   
 0.972
PODANS_1_22290
Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 6.
    
 0.959
PODANS_6_6590
Podospora anserina S mat+ genomic DNA chromosome 6, supercontig 2.
   
 0.956
PODANS_4_2490
Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 2.
  
 0.935
A0A090CI13
RanBD1 domain-containing protein.
    
 0.926
PODANS_1_13560
Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 3.
  
 0.913
PODANS_1_12600
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.878
A0A090C988
Putative nucleoporin.
  
 
 
 0.846
Your Current Organism:
Podospora anserina
NCBI taxonomy Id: 515849
Other names: P. anserina S mat+, Podospora anserina FGSC #10383, Podospora anserina S mat+
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