STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090D4X4Putative GATA type zinc finger protein. (602 aa)    
Predicted Functional Partners:
PODANS_3_5080
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
 0.805
PODANS_1_23160
Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 6.
    
 0.561
A0A090CAL0
Putative nitrogen catabolic enzyme regulatory protein areA.
    
0.557
PODANS_6_2590
Podospora anserina S mat+ genomic DNA chromosome 6, supercontig 2.
    
 0.445
PODANS_3_1870
Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
  
 0.432
PODANS_3_4260
Podospora anserina S mat+ genomic DNA chromosome 3, supercontig 2.
      
 0.429
PODANS_6_1720
Podospora anserina S mat+ genomic DNA chromosome 6, supercontig 2.
     
0.424
PODANS_2_3860
Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2.
    
 
 0.401
Your Current Organism:
Podospora anserina
NCBI taxonomy Id: 515849
Other names: P. anserina S mat+, Podospora anserina FGSC #10383, Podospora anserina S mat+
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