STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PODANS_6_1460Podospora anserina S mat+ genomic DNA chromosome 6, supercontig 2. (588 aa)    
Predicted Functional Partners:
PODANS_2_8620
Putative transcription-associated protein similar to TRA1 of Saccharomyces cerevisiae; Belongs to the PI3/PI4-kinase family.
    
 0.997
A0A090C9N6
Putative transcription initiation factor TFIID subunit 9.
   
 0.996
A0A090CNM0
Putative transcription initiation factor TFIID subunit 12.
    
 0.996
PODANS_2_13960
Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 3.
    
 0.996
PODANS_5_8980
Podospora anserina S mat+ genomic DNA chromosome 5, supercontig 9.
    
 0.996
PODANS_6_11840
Podospora anserina S mat+ genomic DNA chromosome 6, supercontig 1.
    
 0.996
PODANS_2_3810
Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2.
    
 0.996
A0A090C8M7
Putative transcriptional adapter 3.
    
 0.995
PODANS_6_6550
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.995
PODANS_2_7000
Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2.
    
 0.995
Your Current Organism:
Podospora anserina
NCBI taxonomy Id: 515849
Other names: P. anserina S mat+, Podospora anserina FGSC #10383, Podospora anserina S mat+
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