STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT73915.1Protein of unknown function. (233 aa)    
Predicted Functional Partners:
SIT73921.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
 
     0.959
SIT78063.1
Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain.
 
   
 0.871
SIT78016.1
Virulence factor.
 
     0.801
SIT73943.1
Trimethylamine---corrinoid protein Co-methyltransferase; Belongs to the trimethylamine methyltransferase family.
 
     0.787
SIT84388.1
Trimethylamine---corrinoid protein Co-methyltransferase; Belongs to the trimethylamine methyltransferase family.
 
     0.786
SIT78008.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
 
     0.776
SIT78012.1
Methylenetetrahydrofolate reductase (NADPH).
 
     0.733
SIT74271.1
Hypothetical protein.
  
     0.730
SIT73927.1
DNA repair photolyase.
     
 0.721
SIT84583.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
 
     0.708
Your Current Organism:
Pontibaca methylaminivorans
NCBI taxonomy Id: 515897
Other names: DSM 21219, KCTC 22497, P. methylaminivorans, Pontibaca methylaminivorans Kim et al. 2010, alpha proteobacterium GRP21, alpha proteobacterium PH34, strain GRP21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.