STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT76293.1Protein of unknown function. (151 aa)    
Predicted Functional Partners:
SIT76284.1
Sulfite reductase (NADPH) hemoprotein beta-component.
 
 
 0.995
SIT76290.1
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite.
  
 0.994
SIT76278.1
Protein of unknown function.
 
    0.917
SIT76298.1
ferredoxin--NADP+ reductase.
 
     0.817
SIT76275.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase/uroporphyrin-III C-methyltransferase.
  
    0.799
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
  
 
  0.616
SIT76270.1
Transcriptional regulator, AsnC family.
       0.527
SIT77567.1
Dihydroneopterin aldolase.
  
     0.416
Your Current Organism:
Pontibaca methylaminivorans
NCBI taxonomy Id: 515897
Other names: DSM 21219, KCTC 22497, P. methylaminivorans, Pontibaca methylaminivorans Kim et al. 2010, alpha proteobacterium GRP21, alpha proteobacterium PH34, strain GRP21
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