STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT76399.1Hint domain-containing protein. (336 aa)    
Predicted Functional Partners:
SIT83061.1
Pectate lyase superfamily protein.
  
 
  0.842
SIT85307.1
Core-2/I-Branching enzyme.
  
     0.774
SIT85303.1
Hypothetical protein.
  
     0.773
SIT76408.1
Glycosyl transferase family 2; Non-canonical start codon; manually curated.
 
     0.772
SIT85313.1
Glycosyl transferase family 2.
  
     0.771
SIT82262.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.769
SIT86927.1
ABC-type polysaccharide/polyol phosphate export permease.
  
     0.762
SIT80411.1
Hypothetical protein.
  
     0.761
SIT83796.1
Hypothetical protein.
  
     0.760
SIT78490.1
Hypothetical protein.
  
     0.759
Your Current Organism:
Pontibaca methylaminivorans
NCBI taxonomy Id: 515897
Other names: DSM 21219, KCTC 22497, P. methylaminivorans, Pontibaca methylaminivorans Kim et al. 2010, alpha proteobacterium GRP21, alpha proteobacterium PH34, strain GRP21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.