STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT76699.1Protein of unknown function. (92 aa)    
Predicted Functional Partners:
SIT80433.1
Flagellar protein FlbT.
   
    0.999
SIT77816.1
Serine/threonine-protein kinase RsbW.
   
    0.942
SIT80441.1
Flagellar protein FlaF.
   
    0.942
SIT80450.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
    0.885
SIT76026.1
Flagellar motor switch protein FliG.
  
    0.875
SIT77092.1
Flp pilus assembly protein TadG.
  
    0.821
SIT79088.1
Diguanylate cyclase/phosphodiesterase.
  
    0.820
SIT85255.1
Flagellar hook-associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family.
   
    0.816
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
 
     0.755
SIT83376.1
Uncharacterized conserved protein, heparinase superfamily.
  
     0.684
Your Current Organism:
Pontibaca methylaminivorans
NCBI taxonomy Id: 515897
Other names: DSM 21219, KCTC 22497, P. methylaminivorans, Pontibaca methylaminivorans Kim et al. 2010, alpha proteobacterium GRP21, alpha proteobacterium PH34, strain GRP21
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