Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT76850.1 | SIT76854.1 | SAMN05421849_0610 | SAMN05421849_0611 | Glycine betaine/proline transport system substrate-binding protein. | Glycine betaine/proline transport system permease protein. | 0.998 |
SIT76850.1 | SIT76860.1 | SAMN05421849_0610 | SAMN05421849_0612 | Glycine betaine/proline transport system substrate-binding protein. | Glycine betaine/proline transport system ATP-binding protein. | 0.996 |
SIT76850.1 | SIT84800.1 | SAMN05421849_0610 | SAMN05421849_2188 | Glycine betaine/proline transport system substrate-binding protein. | Glycine betaine/proline transport system permease protein. | 0.884 |
SIT76850.1 | SIT84805.1 | SAMN05421849_0610 | SAMN05421849_2189 | Glycine betaine/proline transport system substrate-binding protein. | Glycine betaine/proline transport system ATP-binding protein. | 0.966 |
SIT76850.1 | SIT84810.1 | SAMN05421849_0610 | SAMN05421849_2190 | Glycine betaine/proline transport system substrate-binding protein. | Glycine betaine/proline transport system substrate-binding protein. | 0.803 |
SIT76850.1 | SIT85164.1 | SAMN05421849_0610 | SAMN05421849_2264 | Glycine betaine/proline transport system substrate-binding protein. | Glycine betaine/proline transport system substrate-binding protein. | 0.803 |
SIT76850.1 | SIT85167.1 | SAMN05421849_0610 | SAMN05421849_2265 | Glycine betaine/proline transport system substrate-binding protein. | Glycine betaine/proline transport system permease protein. | 0.990 |
SIT76850.1 | SIT85172.1 | SAMN05421849_0610 | SAMN05421849_2266 | Glycine betaine/proline transport system substrate-binding protein. | Glycine betaine/proline transport system ATP-binding protein. | 0.976 |
SIT76850.1 | betB | SAMN05421849_0610 | SAMN05421849_0609 | Glycine betaine/proline transport system substrate-binding protein. | Betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid. | 0.589 |
SIT76850.1 | betI | SAMN05421849_0610 | SAMN05421849_1160 | Glycine betaine/proline transport system substrate-binding protein. | Transcriptional regulator, TetR family; Repressor involved in choline regulation of the bet genes. | 0.860 |
SIT76854.1 | SIT76850.1 | SAMN05421849_0611 | SAMN05421849_0610 | Glycine betaine/proline transport system permease protein. | Glycine betaine/proline transport system substrate-binding protein. | 0.998 |
SIT76854.1 | SIT76860.1 | SAMN05421849_0611 | SAMN05421849_0612 | Glycine betaine/proline transport system permease protein. | Glycine betaine/proline transport system ATP-binding protein. | 0.999 |
SIT76854.1 | SIT84805.1 | SAMN05421849_0611 | SAMN05421849_2189 | Glycine betaine/proline transport system permease protein. | Glycine betaine/proline transport system ATP-binding protein. | 0.984 |
SIT76854.1 | SIT84810.1 | SAMN05421849_0611 | SAMN05421849_2190 | Glycine betaine/proline transport system permease protein. | Glycine betaine/proline transport system substrate-binding protein. | 0.808 |
SIT76854.1 | SIT85164.1 | SAMN05421849_0611 | SAMN05421849_2264 | Glycine betaine/proline transport system permease protein. | Glycine betaine/proline transport system substrate-binding protein. | 0.985 |
SIT76854.1 | SIT85172.1 | SAMN05421849_0611 | SAMN05421849_2266 | Glycine betaine/proline transport system permease protein. | Glycine betaine/proline transport system ATP-binding protein. | 0.985 |
SIT76860.1 | SIT76850.1 | SAMN05421849_0612 | SAMN05421849_0610 | Glycine betaine/proline transport system ATP-binding protein. | Glycine betaine/proline transport system substrate-binding protein. | 0.996 |
SIT76860.1 | SIT76854.1 | SAMN05421849_0612 | SAMN05421849_0611 | Glycine betaine/proline transport system ATP-binding protein. | Glycine betaine/proline transport system permease protein. | 0.999 |
SIT76860.1 | SIT84800.1 | SAMN05421849_0612 | SAMN05421849_2188 | Glycine betaine/proline transport system ATP-binding protein. | Glycine betaine/proline transport system permease protein. | 0.972 |
SIT76860.1 | SIT84810.1 | SAMN05421849_0612 | SAMN05421849_2190 | Glycine betaine/proline transport system ATP-binding protein. | Glycine betaine/proline transport system substrate-binding protein. | 0.956 |
page 1 of 4