Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT74209.1 | SIT77334.1 | SAMN05421849_0118 | SAMN05421849_0717 | Carboxypeptidase Taq Metallo peptidase. MEROPS family M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | Oligoendopeptidase F. | 0.423 |
SIT77039.1 | SIT77334.1 | SAMN05421849_0651 | SAMN05421849_0717 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Oligoendopeptidase F. | 0.408 |
SIT77039.1 | murB | SAMN05421849_0651 | SAMN05421849_0674 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | UDP-N-acetylmuramate dehydrogenase; Cell wall formation. | 0.424 |
SIT77039.1 | murI | SAMN05421849_0651 | SAMN05421849_0058 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.540 |
SIT77311.1 | SIT77321.1 | SAMN05421849_0712 | SAMN05421849_0714 | Ribosome-associated heat shock protein Hsp15. | Tetratricopeptide repeat-containing protein. | 0.728 |
SIT77311.1 | SIT77326.1 | SAMN05421849_0712 | SAMN05421849_0715 | Ribosome-associated heat shock protein Hsp15. | SCP-2 sterol transfer family protein. | 0.677 |
SIT77311.1 | SIT77331.1 | SAMN05421849_0712 | SAMN05421849_0716 | Ribosome-associated heat shock protein Hsp15. | Lysophospholipase. | 0.677 |
SIT77311.1 | SIT77334.1 | SAMN05421849_0712 | SAMN05421849_0717 | Ribosome-associated heat shock protein Hsp15. | Oligoendopeptidase F. | 0.446 |
SIT77321.1 | SIT77311.1 | SAMN05421849_0714 | SAMN05421849_0712 | Tetratricopeptide repeat-containing protein. | Ribosome-associated heat shock protein Hsp15. | 0.728 |
SIT77321.1 | SIT77326.1 | SAMN05421849_0714 | SAMN05421849_0715 | Tetratricopeptide repeat-containing protein. | SCP-2 sterol transfer family protein. | 0.708 |
SIT77321.1 | SIT77331.1 | SAMN05421849_0714 | SAMN05421849_0716 | Tetratricopeptide repeat-containing protein. | Lysophospholipase. | 0.669 |
SIT77321.1 | SIT77334.1 | SAMN05421849_0714 | SAMN05421849_0717 | Tetratricopeptide repeat-containing protein. | Oligoendopeptidase F. | 0.425 |
SIT77326.1 | SIT77311.1 | SAMN05421849_0715 | SAMN05421849_0712 | SCP-2 sterol transfer family protein. | Ribosome-associated heat shock protein Hsp15. | 0.677 |
SIT77326.1 | SIT77321.1 | SAMN05421849_0715 | SAMN05421849_0714 | SCP-2 sterol transfer family protein. | Tetratricopeptide repeat-containing protein. | 0.708 |
SIT77326.1 | SIT77331.1 | SAMN05421849_0715 | SAMN05421849_0716 | SCP-2 sterol transfer family protein. | Lysophospholipase. | 0.839 |
SIT77326.1 | SIT77334.1 | SAMN05421849_0715 | SAMN05421849_0717 | SCP-2 sterol transfer family protein. | Oligoendopeptidase F. | 0.623 |
SIT77331.1 | SIT77311.1 | SAMN05421849_0716 | SAMN05421849_0712 | Lysophospholipase. | Ribosome-associated heat shock protein Hsp15. | 0.677 |
SIT77331.1 | SIT77321.1 | SAMN05421849_0716 | SAMN05421849_0714 | Lysophospholipase. | Tetratricopeptide repeat-containing protein. | 0.669 |
SIT77331.1 | SIT77326.1 | SAMN05421849_0716 | SAMN05421849_0715 | Lysophospholipase. | SCP-2 sterol transfer family protein. | 0.839 |
SIT77331.1 | SIT77334.1 | SAMN05421849_0716 | SAMN05421849_0717 | Lysophospholipase. | Oligoendopeptidase F. | 0.699 |
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