STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT77897.1Uncharacterized conserved protein, DUF1778 family. (96 aa)    
Predicted Functional Partners:
SIT77894.1
Acetyltransferase (GNAT) family protein.
   
   0.982
SIT82869.1
Ribosomal-protein-alanine N-acetyltransferase.
   
   0.920
SIT84710.1
Putative acetyltransferase; Manually curated.
   
   0.920
ectA
Diaminobutyrate acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A.
   
   0.920
SIT78822.1
Predicted N-acetyltransferase YhbS.
   
   0.845
SIT77890.1
Site-specific DNA recombinase.
       0.697
SIT77900.1
Hypothetical protein.
       0.628
SIT77903.1
Transcriptional regulator, AlpA family.
       0.628
Your Current Organism:
Pontibaca methylaminivorans
NCBI taxonomy Id: 515897
Other names: DSM 21219, KCTC 22497, P. methylaminivorans, Pontibaca methylaminivorans Kim et al. 2010, alpha proteobacterium GRP21, alpha proteobacterium PH34, strain GRP21
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