STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT77946.1Cysteine desulfurase. (347 aa)    
Predicted Functional Partners:
SIT75941.1
NifU homolog involved in Fe-S cluster formation.
  
 0.999
SIT77949.1
Transcriptional regulator, BadM/Rrf2 family.
 
 
 0.995
SIT84609.1
tRNA 2-thiouridine synthesizing protein A; Belongs to the sulfur carrier protein TusA family.
   
 0.995
SIT77646.1
Ferredoxin, 2Fe-2S.
  
 0.990
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
   
 0.948
SIT76261.1
Iron-binding apoprotein IscA; Belongs to the HesB/IscA family.
 
  
 0.945
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.927
SIT76830.1
Acyl carrier protein.
    
 
 0.927
SIT78446.1
Transcriptional regulator, BadM/Rrf2 family.
  
 
 0.883
SIT79479.1
DnaJ like chaperone protein.
  
 
 0.843
Your Current Organism:
Pontibaca methylaminivorans
NCBI taxonomy Id: 515897
Other names: DSM 21219, KCTC 22497, P. methylaminivorans, Pontibaca methylaminivorans Kim et al. 2010, alpha proteobacterium GRP21, alpha proteobacterium PH34, strain GRP21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.