STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT79033.1Cu-processing system ATP-binding protein. (298 aa)    
Predicted Functional Partners:
SIT79027.1
Cu-processing system permease protein.
 
 0.997
SIT79038.1
Nitrous oxidase accessory protein.
 
 0.982
SIT79022.1
Copper chaperone NosL.
 
 
 0.975
SIT79043.1
Nitrous oxide reductase apoprotein.
 
 
 0.975
SIT79049.1
NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator.
 
  
 0.949
SIT79016.1
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
     0.923
SIT82473.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
  
 
0.923
SIT85172.1
Glycine betaine/proline transport system ATP-binding protein.
 
     
0.900
SIT78125.1
ABC-2 type transport system permease protein.
 
 
 0.874
SIT78698.1
NosR/NirI family transcriptional regulator, nitrite reductase regulator.
 
  
 0.863
Your Current Organism:
Pontibaca methylaminivorans
NCBI taxonomy Id: 515897
Other names: DSM 21219, KCTC 22497, P. methylaminivorans, Pontibaca methylaminivorans Kim et al. 2010, alpha proteobacterium GRP21, alpha proteobacterium PH34, strain GRP21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.