Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SIT81580.1 | SIT81587.1 | SAMN05421849_1504 | SAMN05421849_1505 | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Hypothetical protein. | 0.530 |
| SIT81580.1 | SIT81590.1 | SAMN05421849_1504 | SAMN05421849_1506 | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Glyoxylase, beta-lactamase superfamily II. | 0.708 |
| SIT81580.1 | SIT81606.1 | SAMN05421849_1504 | SAMN05421849_1508 | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Hypothetical protein. | 0.501 |
| SIT81580.1 | cysQ | SAMN05421849_1504 | SAMN05421849_2457 | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. | 0.895 |
| SIT81580.1 | glmS | SAMN05421849_1504 | SAMN05421849_0536 | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.462 |
| SIT81580.1 | glyA | SAMN05421849_1504 | SAMN05421849_1712 | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.808 |
| SIT81580.1 | polA | SAMN05421849_1504 | SAMN05421849_1476 | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.472 |
| SIT81580.1 | prmC | SAMN05421849_1504 | SAMN05421849_1956 | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.860 |
| SIT81580.1 | topA | SAMN05421849_1504 | SAMN05421849_1036 | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.476 |
| SIT81580.1 | tsaD | SAMN05421849_1504 | SAMN05421849_1418 | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.686 |
| SIT81587.1 | SIT81580.1 | SAMN05421849_1505 | SAMN05421849_1504 | Hypothetical protein. | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.530 |
| SIT81587.1 | SIT81590.1 | SAMN05421849_1505 | SAMN05421849_1506 | Hypothetical protein. | Glyoxylase, beta-lactamase superfamily II. | 0.760 |
| SIT81587.1 | SIT81606.1 | SAMN05421849_1505 | SAMN05421849_1508 | Hypothetical protein. | Hypothetical protein. | 0.464 |
| SIT81590.1 | SIT81580.1 | SAMN05421849_1506 | SAMN05421849_1504 | Glyoxylase, beta-lactamase superfamily II. | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.708 |
| SIT81590.1 | SIT81587.1 | SAMN05421849_1506 | SAMN05421849_1505 | Glyoxylase, beta-lactamase superfamily II. | Hypothetical protein. | 0.760 |
| SIT81590.1 | SIT81606.1 | SAMN05421849_1506 | SAMN05421849_1508 | Glyoxylase, beta-lactamase superfamily II. | Hypothetical protein. | 0.690 |
| SIT81606.1 | SIT81580.1 | SAMN05421849_1508 | SAMN05421849_1504 | Hypothetical protein. | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.501 |
| SIT81606.1 | SIT81587.1 | SAMN05421849_1508 | SAMN05421849_1505 | Hypothetical protein. | Hypothetical protein. | 0.464 |
| SIT81606.1 | SIT81590.1 | SAMN05421849_1508 | SAMN05421849_1506 | Hypothetical protein. | Glyoxylase, beta-lactamase superfamily II. | 0.690 |
| cysQ | SIT81580.1 | SAMN05421849_2457 | SAMN05421849_1504 | 3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.895 |
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