STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT84579.1Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. (439 aa)    
Predicted Functional Partners:
SIT75723.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.984
SIT81368.1
Histidine kinase.
 
0.968
SIT80809.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 0.962
SIT76892.1
Two-component system, OmpR family, phosphate regulon response regulator OmpR.
 0.946
SIT84814.1
Two-component system, OmpR family, torCAD operon response regulator TorR.
 0.928
SIT76102.1
Two-component system, OmpR family, phosphate regulon response regulator PhoB.
 0.916
SIT86710.1
PAS domain S-box-containing protein.
   
 0.872
SIT86728.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
   
 0.872
SIT79715.1
Two component transcriptional regulator, winged helix family.
 0.870
SIT82236.1
Two component transcriptional regulator, winged helix family.
 0.863
Your Current Organism:
Pontibaca methylaminivorans
NCBI taxonomy Id: 515897
Other names: DSM 21219, KCTC 22497, P. methylaminivorans, Pontibaca methylaminivorans Kim et al. 2010, alpha proteobacterium GRP21, alpha proteobacterium PH34, strain GRP21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.