STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT84820.1Two-component system, OmpR family, sensor histidine kinase TorS. (984 aa)    
Predicted Functional Partners:
SIT74334.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
 
 0.999
SIT86710.1
PAS domain S-box-containing protein.
 0.999
SIT86728.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
  
 0.999
SIT80809.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 0.998
SIT81368.1
Histidine kinase.
 
0.998
SIT84823.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
 
 0.998
SIT86730.1
PAS domain S-box-containing protein.
 0.997
SIT85083.1
Response regulator receiver modulated diguanylate cyclase.
 0.996
SIT79088.1
Diguanylate cyclase/phosphodiesterase.
 
 0.992
SIT78000.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
0.990
Your Current Organism:
Pontibaca methylaminivorans
NCBI taxonomy Id: 515897
Other names: DSM 21219, KCTC 22497, P. methylaminivorans, Pontibaca methylaminivorans Kim et al. 2010, alpha proteobacterium GRP21, alpha proteobacterium PH34, strain GRP21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.