STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT85172.1Glycine betaine/proline transport system ATP-binding protein. (365 aa)    
Predicted Functional Partners:
SIT85167.1
Glycine betaine/proline transport system permease protein.
 0.996
SIT85164.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.991
SIT76854.1
Glycine betaine/proline transport system permease protein.
 0.985
SIT84800.1
Glycine betaine/proline transport system permease protein.
 0.983
SIT76850.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.976
SIT84810.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.960
SIT82780.1
Peptide/nickel transport system ATP-binding protein.
 
    
0.906
SIT79033.1
Cu-processing system ATP-binding protein.
 
     
0.900
SIT75755.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    
 0.827
SIT82773.1
Peptide/nickel transport system ATP-binding protein.
 
    
0.631
Your Current Organism:
Pontibaca methylaminivorans
NCBI taxonomy Id: 515897
Other names: DSM 21219, KCTC 22497, P. methylaminivorans, Pontibaca methylaminivorans Kim et al. 2010, alpha proteobacterium GRP21, alpha proteobacterium PH34, strain GRP21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.