STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT86614.1Prokaryotic molybdopterin-containing oxidoreductase family, membrane subunit. (445 aa)    
Predicted Functional Partners:
SIT86609.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.999
SIT86632.1
Cytochrome c oxidase subunit 2.
 
 
 0.997
SIT86606.1
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit.
 
 
 0.996
SIT86623.1
Hypothetical protein.
 
   0.996
SIT86617.1
Quinol:cytochrome c oxidoreductase membrane protein.
 
 
  0.991
SIT86620.1
Cytochrome C oxidase, cbb3-type, subunit III.
 
   
 0.951
SIT86628.1
Protein SCO1/2.
 
   
 0.950
SIT78774.1
Cytochrome c.
   
 0.937
SIT84268.1
Cytochrome c2.
   
 0.937
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
   0.929
Your Current Organism:
Pontibaca methylaminivorans
NCBI taxonomy Id: 515897
Other names: DSM 21219, KCTC 22497, P. methylaminivorans, Pontibaca methylaminivorans Kim et al. 2010, alpha proteobacterium GRP21, alpha proteobacterium PH34, strain GRP21
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