Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT76231.1 | SIT82239.1 | SAMN05421849_0470 | SAMN05421849_1649 | Exodeoxyribonuclease-3. | Exodeoxyribonuclease-3. | 0.928 |
SIT76231.1 | SIT86830.1 | SAMN05421849_0470 | SAMN05421849_2440 | Exodeoxyribonuclease-3. | tRNA(Arg) A34 adenosine deaminase TadA. | 0.675 |
SIT82239.1 | SIT76231.1 | SAMN05421849_1649 | SAMN05421849_0470 | Exodeoxyribonuclease-3. | Exodeoxyribonuclease-3. | 0.928 |
SIT82239.1 | SIT86830.1 | SAMN05421849_1649 | SAMN05421849_2440 | Exodeoxyribonuclease-3. | tRNA(Arg) A34 adenosine deaminase TadA. | 0.675 |
SIT86830.1 | SIT76231.1 | SAMN05421849_2440 | SAMN05421849_0470 | tRNA(Arg) A34 adenosine deaminase TadA. | Exodeoxyribonuclease-3. | 0.675 |
SIT86830.1 | SIT82239.1 | SAMN05421849_2440 | SAMN05421849_1649 | tRNA(Arg) A34 adenosine deaminase TadA. | Exodeoxyribonuclease-3. | 0.675 |
SIT86830.1 | SIT86832.1 | SAMN05421849_2440 | SAMN05421849_2441 | tRNA(Arg) A34 adenosine deaminase TadA. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.596 |
SIT86830.1 | SIT86834.1 | SAMN05421849_2440 | SAMN05421849_2442 | tRNA(Arg) A34 adenosine deaminase TadA. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.596 |
SIT86830.1 | SIT86936.1 | SAMN05421849_2440 | SAMN05421849_2462 | tRNA(Arg) A34 adenosine deaminase TadA. | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | 0.599 |
SIT86830.1 | SIT87105.1 | SAMN05421849_2440 | SAMN05421849_2571 | tRNA(Arg) A34 adenosine deaminase TadA. | Formiminoglutamate deiminase. | 0.583 |
SIT86830.1 | guaA | SAMN05421849_2440 | SAMN05421849_0069 | tRNA(Arg) A34 adenosine deaminase TadA. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.554 |
SIT86830.1 | hisE | SAMN05421849_2440 | SAMN05421849_1143 | tRNA(Arg) A34 adenosine deaminase TadA. | phosphoribosyl-ATP pyrophosphatase. | 0.701 |
SIT86830.1 | ribB | SAMN05421849_2440 | SAMN05421849_0646 | tRNA(Arg) A34 adenosine deaminase TadA. | GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.815 |
SIT86830.1 | upp | SAMN05421849_2440 | SAMN05421849_1715 | tRNA(Arg) A34 adenosine deaminase TadA. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.872 |
SIT86832.1 | SIT86830.1 | SAMN05421849_2441 | SAMN05421849_2440 | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | tRNA(Arg) A34 adenosine deaminase TadA. | 0.596 |
SIT86832.1 | SIT86834.1 | SAMN05421849_2441 | SAMN05421849_2442 | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.999 |
SIT86834.1 | SIT86830.1 | SAMN05421849_2442 | SAMN05421849_2440 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | tRNA(Arg) A34 adenosine deaminase TadA. | 0.596 |
SIT86834.1 | SIT86832.1 | SAMN05421849_2442 | SAMN05421849_2441 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.999 |
SIT86936.1 | SIT86830.1 | SAMN05421849_2462 | SAMN05421849_2440 | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | tRNA(Arg) A34 adenosine deaminase TadA. | 0.599 |
SIT87105.1 | SIT86830.1 | SAMN05421849_2571 | SAMN05421849_2440 | Formiminoglutamate deiminase. | tRNA(Arg) A34 adenosine deaminase TadA. | 0.583 |
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