Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VC82_105Amidohydrolase; Pfam:pfam13147 Amidohydrolase. (487 aa)    
Predicted Functional Partners:
VC82_106
Pfam:pfam01261 Xylose isomerase-like TIM barrel.
       0.773
VC82_1840
Hypothetical protein; Pfam:pfam07883 Cupin domain.
  
     0.615
VC82_821
Hypothetical protein.
  
     0.613
VC82_1737
Histidine ammonia-lyase; Pfam:pfam00221 Aromatic amino acid lyase.
  
  
 0.592
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.580
VC82_104
MFS transporter permease; Pfam:pfam07690 Major Facilitator Superfamily.
       0.572
VC82_1591
Acylaminoacyl-peptidase; Pfam:pfam00326 Prolyl oligopeptidase family.
  
     0.467
VC82_393
Secreted protein containing N-terminal zinc-dependent carboxypeptidase related domain; Pfam:pfam00246 Zinc carboxypeptidase.
  
     0.445
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.