Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC82_115Pfam:pfam00080 Copper/zinc superoxide dismutase (SODC). (195 aa)    
Predicted Functional Partners:
VC82_627
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 0.979
VC82_1806
Heavy-metal transporting P-type ATPase; Pfam:pfam00122 E1-E2 ATPase.
   
 0.933
VC82_97
Trehalose-phosphatase; Pfam:pfam00982 Glycosyltransferase family 20.
   
  
 0.780
VC82_1609
Pfam:pfam00403 Heavy-metal-associated domain.
   
 0.587
VC82_1815
Copper chaperone; Pfam:pfam02411 MerT mercuric transport protein.
   
 0.587
VC82_964
Pfam:pfam00403 Heavy-metal-associated domain.
   
 0.587
VC82_965
Pfam:pfam00403 Heavy-metal-associated domain.
   
 0.587
VC82_114
Peptidase M16; Pfam:pfam00675 Insulinase (Peptidase family M16); Belongs to the peptidase M16 family.
  
    0.560
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
   
   0.549
VC82_116
Alpha-glucosidase; Pfam:pfam10566 Glycoside hydrolase 97.
  
    0.547
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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