Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VC82_116Alpha-glucosidase; Pfam:pfam10566 Glycoside hydrolase 97. (706 aa)    
Predicted Functional Partners:
VC82_42
Alpha-amylase; Pfam:pfam00128 Alpha amylase, catalytic domain.
 
 
 0.938
VC82_331
Pfam:pfam01055 Glycosyl hydrolases family 31; Belongs to the glycosyl hydrolase 31 family.
 
  
  0.918
VC82_333
Trehalose synthase.
  
  
  0.918
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
    
  0.900
VC82_1938
Sugar transporter; Pfam:pfam07690 Major Facilitator Superfamily.
 
     0.629
VC82_115
Pfam:pfam00080 Copper/zinc superoxide dismutase (SODC).
  
    0.547
VC82_413
Periplasmic beta-glucosidase; Pfam:pfam00933 Glycosyl hydrolase family 3 N terminal domain; Belongs to the glycosyl hydrolase 3 family.
 
   
 0.535
VC82_637
Laminarinase; Pfam:pfam00722 Glycosyl hydrolases family 16.
 
   
 0.499
VC82_2309
Hypothetical protein; Pfam:pfam14128 Domain of unknown function (DUF4295).
  
     0.448
VC82_1595
Pfam:pfam00722 Glycosyl hydrolases family 16.
 
   
 0.421
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.