STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC82_1192Pfam:pfam00593 TonB dependent receptor. (810 aa)    
Predicted Functional Partners:
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
    0.798
VC82_1512
Glycosyl hydrolase.
  
     0.633
VC82_1643
Glycosyl hydrolase BNR repeat-containing protein.
  
     0.584
VC82_109
Hypothetical protein.
  
     0.552
VC82_661
Conserved hypothetical periplasmic protein; Pfam:pfam13585 C-terminal domain of CHU protein family.
  
 
   0.539
VC82_1444
Glycosyl hydrolase.
  
     0.525
VC82_2770
Glycosyl hydrolase, BNR repeat.
  
     0.522
VC82_1194
Pfam:pfam00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.510
VC82_1090
Hypothetical protein.
  
   0.484
VC82_2826
Hypothetical protein; Pfam:pfam13088 BNR repeat-like domain.
  
     0.464
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.