Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
VC82_1237Tetratricopeptide TPR_1 repeat-containing protein; Pfam:pfam13414 TPR repeat. (253 aa)    
Predicted Functional Partners:
VC82_1236
Aerotolerance-related exported protein; Pfam:pfam13584 Oxygen tolerance.
   
 0.989
VC82_1234
Pfam:pfam13519 von Willebrand factor type A domain.
 
   
 0.950
VC82_1231
Von Willebrand factor; Pfam:pfam01882 Protein of unknown function DUF58.
 
    0.947
VC82_1235
Tetratricopeptide TPR_1 repeat-containing protein; Pfam:pfam13414 TPR repeat.
 
     0.942
VC82_1232
Hypothetical protein.
 
     0.941
VC82_1233
BatA protein; Pfam:pfam13519 von Willebrand factor type A domain.
 
     0.937
VC82_1230
ATPase AAA; Pfam:pfam07726 ATPase family associated with various cellular activities (AAA).
 
     0.684
VC82_1238
Hypothetical protein.
       0.590
VC82_1227
AAA-4 family protein; Pfam:pfam04326 Divergent AAA domain.
 
     0.499
VC82_3029
Pfam:pfam07949 YbbR-like protein.
  
    0.495
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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