Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VC82_182DNA-binding protein; Pfam:pfam00210 Ferritin-like domain; Belongs to the Dps family. (159 aa)    
Predicted Functional Partners:
VC82_638
Clp protease ClpS; Pfam:pfam02617 ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family.
   
 
 0.699
VC82_183
Transcriptional regulator; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
 
   
 0.685
VC82_2459
BRAMP domain-containing protein; Pfam:pfam03358 NADPH-dependent FMN reductase.
  
  
 0.572
VC82_97
Trehalose-phosphatase; Pfam:pfam00982 Glycosyltransferase family 20.
   
  
 0.467
VC82_1806
Heavy-metal transporting P-type ATPase; Pfam:pfam00122 E1-E2 ATPase.
  
  
 0.414
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.