STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC82_1906Pfam:pfam00155 Aminotransferase class I and II. (366 aa)    
Predicted Functional Partners:
hisB
Pfam:pfam00475 Imidazoleglycerol-phosphate dehydratase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.
 
 
 0.996
hisI
Histidine biosynthesis bifunctional protein HisIE; Pfam:pfam01502 Phosphoribosyl-AMP cyclohydrolase; In the N-terminal section; belongs to the PRA-CH family.
  
  
 0.978
VC82_2071
Pfam:pfam02153 Prephenate dehydrogenase.
  
 
 0.967
VC82_1910
Pfam:pfam00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
    
 0.935
VC82_2069
Pfam:pfam00800 Prephenate dehydratase.
  
 
 0.916
hisC
Pfam:pfam00155 Aminotransferase class I and II; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
  
 
0.908
VC82_893
Phenylalanine 4-monooxygenase; Pfam:pfam00351 Biopterin-dependent aromatic amino acid hydroxylase.
     
 0.905
katG
Catalase/hydroperoxidase HPI(I); Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.903
VC82_2610
D-amino-acid dehydrogenase; Pfam:pfam01266 FAD dependent oxidoreductase.
   
 
 0.903
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
  
 0.867
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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