close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC82_1908Fumarylacetoacetase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. (406 aa)    
Predicted Functional Partners:
VC82_1909
Pfam:pfam04209 homogentisate 1,2-dioxygenase.
 
  
 0.962
VC82_1910
Pfam:pfam00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
  
 0.916
fumC
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 0.842
VC82_1438
Succinate dehydrogenase; Pfam:pfam00890 FAD binding domain.
  
 
  0.826
VC82_1437
Succinate dehydrogenase; Pfam:pfam13085 2Fe-2S iron-sulfur cluster binding domain; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
  0.814
VC82_1439
Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family.
    
  0.807
VC82_1907
Pfam:pfam01613 Flavin reductase like domain.
 
    0.652
VC82_1906
Pfam:pfam00155 Aminotransferase class I and II.
       0.560
VC82_1388
Ferredoxin; Pfam:pfam00970 Oxidoreductase FAD-binding domain.
  
  
 0.536
VC82_92
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
  
 0.412
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.