Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VC82_1925Pfam:pfam03916 Polysulphide reductase, NrfD. (570 aa)    
Predicted Functional Partners:
VC82_1924
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Pfam:pfam13247 4Fe-4S dicluster domain.
 
 
 0.999
VC82_1926
Pfam:pfam11821 Protein of unknown function (DUF3341).
 
 
   0.996
VC82_1927
Pfam:pfam00034 Cytochrome c.
 
 
   0.996
VC82_1928
Conserved membrane protein.
 
 
 0.996
VC82_1923
Pfam:pfam00034 Cytochrome c.
 
 
   0.988
VC82_1705
Oxidoreductase alpha (Molybdopterin) subunit; Pfam:pfam00384 Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.859
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.787
VC82_1929
Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.759
VC82_1930
Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
     
 0.719
VC82_997
Dehydrogenase; Pfam:pfam00034 Cytochrome c.
 
 
   0.529
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.