Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC82_1968Von Willebrand factor type A. (390 aa)    
Predicted Functional Partners:
VC82_1969
Putative signal transduction histidine kinase; Pfam:pfam06580 Histidine kinase.
 
     0.820
VC82_1970
Two component transcriptional regulator, LytTR family; Pfam:pfam00072 Response regulator receiver domain.
 
     0.686
VC82_2757
Magnesium chelatase, subunit ChlI family protein.
  
 
 0.532
VC82_1931
Pfam:pfam10988 Protein of unknown function (DUF2807).
  
     0.512
VC82_1562
Hypothetical protein.
  
     0.451
VC82_110
Pfam:pfam10677 Protein of unknown function (DUF2490).
  
     0.425
VC82_645
Pfam:pfam12412 Protein of unknown function (DUF3667).
  
     0.414
VC82_1052
Ser/Thr phosphatase.
  
     0.409
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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