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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC82_197Pfam:pfam09685 Tic20-like protein. (160 aa)    
Predicted Functional Partners:
VC82_198
Hypothetical protein; Pfam:pfam14534 Domain of unknown function (DUF4440).
  
    0.791
VC82_200
Phage shock protein C, PspC; Pfam:pfam04024 PspC domain.
 
    0.706
VC82_2546
tRNA modification GTPase; Pfam:pfam09685 Tic20-like protein.
  
     0.677
VC82_2733
Hypothetical protein.
  
     0.602
VC82_196
Thioesterase.
       0.563
VC82_2897
Aminopeptidase N.
  
     0.563
VC82_199
Pfam:pfam03551 Transcriptional regulator PadR-like family.
       0.548
VC82_2655
Hypothetical protein.
  
     0.458
VC82_2692
Hypothetical protein.
  
     0.437
VC82_2654
Hypothetical protein; Pfam:pfam13557 Putative MetA-pathway of phenol degradation.
  
     0.432
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.