Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC82_20Putative membrane protein. (75 aa)    
Predicted Functional Partners:
VC82_1342
Pfam:pfam03938 Outer membrane protein (OmpH-like).
  
     0.752
VC82_317
Ribonuclease Z.
  
     0.689
VC82_1423
Hypothetical protein.
  
     0.679
VC82_378
Membrane protein.
  
     0.657
VC82_2458
NAD-dependent epimerase/dehydratase; Pfam:pfam04321 RmlD substrate binding domain.
  
     0.644
VC82_1063
Lysine transporter LysE.
  
     0.624
VC82_2769
Glyoxalase family protein.
  
     0.606
VC82_1155
Esterase; Pfam:pfam00756 Putative esterase.
  
     0.588
VC82_2633
Hypothetical protein.
  
     0.587
VC82_2724
Hypothetical protein.
 
     0.580
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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