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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC82_2005G-D-S-L family lipolytic protein. (499 aa)    
Predicted Functional Partners:
VC82_2004
Pfam:pfam04020 Membrane protein of unknown function.
       0.616
pdxJ
Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
       0.545
VC82_2006
Pfam:pfam12697 Alpha/beta hydrolase family.
  
    0.524
VC82_736
DdaH family protein; Pfam:pfam02274 Amidinotransferase.
  
     0.516
clpX
ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
     
 0.508
VC82_2010
Inorganic polyphosphate/ATP-NAD kinase; Pfam:pfam13568 Outer membrane protein beta-barrel domain.
 
     0.483
VC82_2008
CBS domain containing protein.
 
     0.479
VC82_435
Fibronectin, type III; Pfam:pfam13585 C-terminal domain of CHU protein family.
  
 
   0.478
VC82_812
Pfam:pfam00535 Glycosyl transferase family 2.
  
     0.453
VC82_2030
Membrane protein; Pfam:pfam13715 Domain of unknown function (DUF4480).
  
     0.437
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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