Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC82_207Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (210 aa)    
Predicted Functional Partners:
VC82_208
Hypothetical protein.
 
     0.903
VC82_206
Arsenic resistance protein ArsB; Pfam:pfam01758 Sodium Bile acid symporter family.
  
  
 0.881
VC82_209
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
 
  
 0.716
VC82_1608
Beta-lactamase domain protein; Pfam:pfam00753 Metallo-beta-lactamase superfamily.
  
   0.518
VC82_2519
Tyrosine-protein kinase; Pfam:pfam13614 AAA domain.
  
 
 0.479
VC82_994
Fructan beta-fructosidase; Pfam:pfam00251 Glycosyl hydrolases family 32 N-terminal domain; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.462
VC82_3006
Pyridoxamine 5'-phosphate oxidase; Pfam:pfam11009 Protein of unknown function (DUF2847).
 
   0.430
VC82_210
Hypothetical protein.
       0.400
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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