Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
VC82_2139ApaG. (414 aa)    
Predicted Functional Partners:
VC82_1941
SprA protein; Pfam:pfam14349 Motility related/secretion protein.
  
 
   0.968
VC82_2092
Gliding motility-associated lipoprotein GldB.
  
     0.759
VC82_1393
TPR domain-containing protein.
  
     0.756
VC82_2473
N-acetylglucosamine kinase-like protein.
  
     0.754
VC82_3033
Conserved hypothetical periplasmic protein.
  
     0.753
VC82_2126
PorT protein; Pfam:pfam13568 Outer membrane protein beta-barrel domain.
  
     0.748
VC82_2138
Pfam:pfam12412 Protein of unknown function (DUF3667).
       0.736
VC82_1128
Gliding motility-associated lipoprotein GldD.
  
     0.732
VC82_828
Gliding motility protein GldJ; Pfam:pfam03781 Sulfatase-modifying factor enzyme 1.
  
     0.731
VC82_951
Gliding motility protein GldM; Pfam:pfam12080 GldM C-terminal domain.
  
     0.730
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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