Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
gene fusions
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[Homology]
Score
VC82_216Integrase; Belongs to the 'phage' integrase family. (361 aa)    
Predicted Functional Partners:
VC82_1793
Transcriptional regulator; Pfam:pfam12728 Helix-turn-helix domain.
 
   
 0.743
VC82_1791
ATPase.
  
     0.490
VC82_1039
Outer membrane protein; Pfam:pfam13715 Domain of unknown function (DUF4480).
  
     0.484
VC82_1040
Putative outer membrane protein, probably involved in nutrient binding; Pfam:pfam07980 SusD family.
  
     0.444
VC82_1167
Amidophosphoribosyltransferase; Pfam:pfam00156 Phosphoribosyl transferase domain.
   
    0.401
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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