STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC82_2195Galactokinase; Pfam:pfam08544 GHMP kinases C terminal; Belongs to the GHMP kinase family. (353 aa)    
Predicted Functional Partners:
VC82_404
Pfam:pfam01263 Aldose 1-epimerase.
 
 0.969
VC82_2196
Glucose-1-phosphate thymidylyltransferase; Pfam:pfam00483 Nucleotidyl transferase.
 
  
 0.946
VC82_1863
UDP-glucose 4-epimerase; Pfam:pfam01370 NAD dependent epimerase/dehydratase family; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.932
VC82_2194
Alpha-N-acetylgalactosaminidase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
 
 0.871
VC82_2191
Pfam:pfam06580 Histidine kinase.
 
     0.780
VC82_2197
Pfam:pfam04116 Fatty acid hydroxylase superfamily.
       0.773
VC82_2193
Pfam:pfam01738 Dienelactone hydrolase family.
     
 0.763
VC82_2192
Pfam:pfam00072 Response regulator receiver domain.
       0.736
VC82_702
Aldose 1-epimerase family protein.
  
 
 0.601
VC82_2595
Maf-like protein.
  
 
 0.586
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.