Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VC82_2201Lactate utilization protein B/C; Pfam:pfam02589 Uncharacterized ACR, YkgG family COG1556. (202 aa)    
Predicted Functional Partners:
VC82_2198
valyl-tRNA synthetase; Pfam:pfam00887 Acyl CoA binding protein.
 
     0.881
psd
Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
       0.820
VC82_2200
Pfam:pfam01148 Cytidylyltransferase family; Belongs to the CDS family.
       0.820
rsfS
Ribosome-associated protein IOJAP; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.807
ftsH-2
Peptidase M41; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.771
VC82_563
Pfam:pfam01515 Phosphate acetyl/butaryl transferase.
  
  
 0.722
VC82_2872
Pfam:pfam02913 FAD linked oxidases, C-terminal domain.
  
 
 0.701
VC82_954
Arginase/agmatinase/formiminoglutamase; Pfam:pfam00491 Arginase family; Belongs to the arginase family.
  
     0.700
VC82_21
Hypothetical protein; Pfam:pfam14127 Domain of unknown function (DUF4294).
  
     0.691
VC82_679
Hypothetical protein; Pfam:pfam00593 TonB dependent receptor.
  
     0.691
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.