Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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VC82_231Outer membrane autotransporter barrel domain protein; Pfam:pfam13585 C-terminal domain of CHU protein family. (2830 aa)    
Predicted Functional Partners:
VC82_2520
Putative secreted protein; Pfam:pfam11721 Di-glucose binding within endoplasmic reticulum.
 
 
  0.970
VC82_2521
PKD domain-containing protein; Pfam:pfam01344 Kelch motif.
 
 
  0.957
VC82_1328
Hypothetical protein; Pfam:pfam13585 C-terminal domain of CHU protein family.
  
  
 
0.918
VC82_431
Hypothetical protein; Pfam:pfam13585 C-terminal domain of CHU protein family.
  
  
 
0.905
VC82_2619
Sporulation domain-containing protein.
  
     0.743
VC82_3013
Putative membrane protein; Pfam:pfam11751 Protein of unknown function (DUF3308).
  
 
   0.738
VC82_1329
Pfam:pfam11751 Protein of unknown function (DUF3308).
  
     0.733
VC82_2930
Hypothetical protein.
  
     0.723
VC82_1166
Hypothetical protein.
  
     0.722
VC82_1330
Hypothetical protein; Pfam:pfam13585 C-terminal domain of CHU protein family.
  
     0.720
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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