Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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VC82_233Hypothetical protein; Pfam:pfam00144 Beta-lactamase. (446 aa)    
Predicted Functional Partners:
VC82_621
Alkaline D-peptidase; Pfam:pfam00144 Beta-lactamase.
  
     0.658
VC82_1476
Serine peptidase, family S12; Pfam:pfam00144 Beta-lactamase.
  
     0.607
murQ
N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
    0.562
VC82_235
DeoR family transcripitonal regulator; Pfam:pfam00455 DeoR C terminal sensor domain.
       0.435
VC82_707
Pfam:pfam07075 Protein of unknown function (DUF1343).
 
    0.434
VC82_239
Pfam:pfam00933 Glycosyl hydrolase family 3 N terminal domain.
 
    0.412
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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