Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
VC82_262Tetratricopeptide TPR_1 repeat-containing protein. (253 aa)    
Predicted Functional Partners:
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
  
    0.837
VC82_1290
DNA-binding protein; Pfam:pfam02620 Uncharacterized ACR, COG1399.
  
    0.759
VC82_2014
Outer membrane chaperone Skp (OmpH); Pfam:pfam03938 Outer membrane protein (OmpH-like).
  
  
 0.754
VC82_680
Tetratricopeptide TPR_1 repeat-containing protein; Pfam:pfam12895 Anaphase-promoting complex, cyclosome, subunit 3.
  
     0.726
VC82_2124
Pfam:pfam01103 Surface antigen.
  
    0.725
VC82_2577
Hypothetical protein; Pfam:pfam14123 Domain of unknown function (DUF4290).
  
     0.716
VC82_1168
Conserved hypothetical lipoprotein; Pfam:pfam13205 Bacterial Ig-like domain.
  
     0.702
VC82_959
Lipoprotein; Pfam:pfam04390 Lipopolysaccharide-assembly.
  
     0.699
VC82_1918
Pfam:pfam11028 Protein of unknown function (DUF2723).
  
     0.690
VC82_2470
N-acetyl-gamma-glutamyl-phosphate reductase; Pfam:pfam04357 Family of unknown function (DUF490).
 
   
 0.680
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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