Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC82_269Peptidylprolyl isomerase; Pfam:pfam00254 FKBP-type peptidyl-prolyl cis-trans isomerase. (182 aa)    
Predicted Functional Partners:
VC82_270
Pfam:pfam00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD.
  
 0.851
VC82_268
Phosphoesterase RecJ domain protein; Pfam:pfam01368 DHH family.
       0.817
VC82_1393
TPR domain-containing protein.
  
 
  0.773
VC82_271
Amino acid permease; Pfam:pfam12725 Protein of unknown function (DUF3810).
       0.773
VC82_2103
S-adenosyl-methyltransferase MraW.
  
     0.709
VC82_1417
Sporulation domain-containing protein; Pfam:pfam05036 Sporulation related domain.
  
     0.707
VC82_2470
N-acetyl-gamma-glutamyl-phosphate reductase; Pfam:pfam04357 Family of unknown function (DUF490).
 
     0.706
VC82_960
Hypothetical protein.
  
     0.671
VC82_1150
Hypothetical protein; Pfam:pfam14092 Domain of unknown function (DUF4270).
  
 
   0.663
VC82_2124
Pfam:pfam01103 Surface antigen.
  
   0.658
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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