Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VC82_271Amino acid permease; Pfam:pfam12725 Protein of unknown function (DUF3810). (355 aa)    
Predicted Functional Partners:
VC82_268
Phosphoesterase RecJ domain protein; Pfam:pfam01368 DHH family.
       0.773
VC82_269
Peptidylprolyl isomerase; Pfam:pfam00254 FKBP-type peptidyl-prolyl cis-trans isomerase.
       0.773
VC82_270
Pfam:pfam00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD.
       0.773
VC82_272
Amidohydrolase; Pfam:pfam13147 Amidohydrolase.
       0.653
VC82_273
Pfam:pfam13147 Amidohydrolase.
       0.633
VC82_1878
Acid protease; Pfam:pfam13650 Aspartyl protease.
  
     0.613
VC82_5
Conserved hypothetical periplasmic protein.
  
     0.572
VC82_267
Pfam:pfam09423 PhoD-like phosphatase.
       0.560
VC82_950
Gliding motility protein GldO.
  
     0.530
VC82_2272
Hypothetical protein.
  
     0.517
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.