Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VC82_2802Conserved hypothetical periplasmic protein; Pfam:pfam06439 Domain of Unknown Function (DUF1080). (313 aa)    
Predicted Functional Partners:
VC82_2801
Conserved hypothetical periplasmic protein; Pfam:pfam06439 Domain of Unknown Function (DUF1080).
 
     0.689
VC82_2830
Conserved hypothetical periplasmic protein; Pfam:pfam06439 Domain of Unknown Function (DUF1080).
  
     0.661
VC82_2805
Pfam:pfam04794 YdjC-like protein.
 
     0.654
VC82_923
Hypothetical protein; Pfam:pfam06439 Domain of Unknown Function (DUF1080).
  
     0.622
VC82_1157
Quinoprotein glucose dehydrogenase; Pfam:pfam13442 Cytochrome C oxidase, cbb3-type, subunit III.
  
     0.591
VC82_922
Oxidoreductase domain protein; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
     0.587
VC82_1555
Putative multi-domain protein; Pfam:pfam06439 Domain of Unknown Function (DUF1080).
 
     0.518
VC82_2857
Putative secreted glycosyl hydrolase; Pfam:pfam06439 Domain of Unknown Function (DUF1080).
  
     0.517
VC82_521
Oxidoreductase domain protein; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
     0.507
VC82_1487
PKD domain containing protein; Pfam:pfam06283 Trehalose utilisation.
 
     0.497
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
Server load: low (24%) [HD]