Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
VC82_317Ribonuclease Z. (110 aa)    
Predicted Functional Partners:
pyrB
Pfam:pfam02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
       0.820
VC82_319
Pyrimidine regulatory protein PyrR; Pfam:pfam00156 Phosphoribosyl transferase domain.
       0.820
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
       0.819
VC82_1227
AAA-4 family protein; Pfam:pfam04326 Divergent AAA domain.
  
     0.768
VC82_2654
Hypothetical protein; Pfam:pfam13557 Putative MetA-pathway of phenol degradation.
  
     0.768
VC82_1368
Hypothetical protein.
  
     0.766
VC82_52
Hypothetical protein; Pfam:pfam14060 Domain of unknown function (DUF4252).
  
     0.766
VC82_53
Conserved hypothetical periplasmic protein; Pfam:pfam14060 Domain of unknown function (DUF4252).
  
     0.764
VC82_2470
N-acetyl-gamma-glutamyl-phosphate reductase; Pfam:pfam04357 Family of unknown function (DUF490).
  
     0.762
VC82_2272
Hypothetical protein.
  
     0.759
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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