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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC82_331Pfam:pfam01055 Glycosyl hydrolases family 31; Belongs to the glycosyl hydrolase 31 family. (799 aa)    
Predicted Functional Partners:
VC82_333
Trehalose synthase.
    
  0.949
VC82_42
Alpha-amylase; Pfam:pfam00128 Alpha amylase, catalytic domain.
 
 
 0.936
VC82_413
Periplasmic beta-glucosidase; Pfam:pfam00933 Glycosyl hydrolase family 3 N terminal domain; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.929
VC82_1037
Maltose phosphorylase; Pfam:pfam03632 Glycosyl hydrolase family 65 central catalytic domain.
 
  
  0.926
VC82_1225
Fructokinase; Pfam:pfam00294 pfkB family carbohydrate kinase.
 
 
 0.922
VC82_116
Alpha-glucosidase; Pfam:pfam10566 Glycoside hydrolase 97.
 
  
  0.916
VC82_1226
Pfam:pfam00128 Alpha amylase, catalytic domain.
  
 
 0.911
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
     
 0.613
glgE
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
  
  
 0.604
VC82_2327
Aconitate hydratase; Pfam:pfam00330 Aconitase family (aconitate hydratase).
    
   0.546
Your Current Organism:
Muricauda lutaonensis
NCBI taxonomy Id: 516051
Other names: BCRC 17850, KCTC 22339, M. lutaonensis, Muricauda lutaonensis Arun et al. 2009 emend. Hahnke et al. 2016, Muricauda sp. CC-HSB-11, strain CC-HSB-11
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